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Reconstructs a lightweight validated descriptor for an existing phased dataset. HAP counts and chromosome ranges are checked against BIM/FAM. Cohort FAM files may refer to parents outside the dataset; their ancestral parentage must be validated separately in the full pedigree.

Usage

gsim_reference(prefix)

Arguments

prefix

Extension-free HAP/BIM/FAM prefix.

Value

A gsim_reference descriptor containing paths and stable identities.